STRINGSTRING
AAO57243.1 AAO57243.1 AAO57244.1 AAO57244.1 AAO54720.1 AAO54720.1 AAO58516.1 AAO58516.1 AAO54722.1 AAO54722.1 AAO57795.1 AAO57795.1 AAO55130.1 AAO55130.1 AAO58659.1 AAO58659.1 AAO58592.1 AAO58592.1 aroH aroH AAO58593.1 AAO58593.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57243.1Conserved hypothetical protein; Identified by Glimmer2; putative. (194 aa)    
Predicted Functional Partners:
AAO57244.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
AAO54720.1
Conserved hypothetical protein; Similar to GP:17430979; identified by sequence similarity; putative.
  
     0.529
AAO58516.1
Conserved hypothetical protein; Similar to GP:15978939; identified by sequence similarity; putative.
  
   
 0.517
AAO54722.1
Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
     0.508
AAO57795.1
Conserved domain protein.
 
   
 0.493
AAO55130.1
TonB-dependent siderophore receptor, putative; Similar to SP:Q05202, GB:U10528, PID:505694, and SP:P50185; identified by sequence similarity; putative.
  
 
   0.480
AAO58659.1
Colicin/pyocin immunity family protein; Similar to SP:Q03708, GB:X05409, GB:K03001, GB:M26760, GB:M54931, GB:Y00109, GB:M20444, GB:M20445, GB:M20446, GB:M20447, GB:M20448, GB:M20449, GB:M20450, GB:M20451, GB:M20452, GB:M20453, GB:M20454, GB:M20455, GB:M20456, SP:P05091, PID:178390, PID:178396, and PID:178398; identified by sequence similarity; putative.
   
 
 0.472
AAO58592.1
Membrane protein, putative; Identified by match to TIGR protein family HMM TIGR01770.
  
     0.467
aroH
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
     0.461
AAO58593.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.457
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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