STRINGSTRING
AAO57291.1 AAO57291.1 AAO57292.1 AAO57292.1 AAO54063.1 AAO54063.1 AAO58593.1 AAO58593.1 AAO58954.1 AAO58954.1 AAO54861.1 AAO54861.1 abP abP AAO57290.1 AAO57290.1 hflK hflK AAO55464.1 AAO55464.1 AAO56650.1 AAO56650.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AAO57291.1Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948. (220 aa)    
Predicted Functional Partners:
AAO57292.1
Deoxyribonuclease, TatD family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04273.
  
  
 0.903
AAO54063.1
Membrane protein, putative; See PMID:20190049 for expression data; similar to GP:17430601; identified by sequence similarity; putative.
  
     0.673
AAO58593.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.663
AAO58954.1
SPFH domain / Band 7 family protein.
  
   
 0.570
AAO54861.1
Membrane protein, putative; Similar to GP:8218126, and GP:8218126; identified by sequence similarity; putative.
  
     0.519
abP
L-arabinose ABC transporter, periplasmic L-arabinose-binding protein; See PMID:20190049 for expression data.
  
     0.512
AAO57290.1
Transcriptional regulator, TetR family; See PMID:20190049 for expression data; similar to GB:M86823, SP:Q01180, and PID:151967; identified by sequence similarity; putative.
       0.505
hflK
hflK protein; HflC and HflK could encode or regulate a protease.
      
 0.504
AAO55464.1
See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00535.
  
     0.491
AAO56650.1
Lipoprotein, putative; Similar to GP:13937482; identified by sequence similarity; putative.
  
     0.485
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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