STRINGSTRING
AAO57415.1 AAO57415.1 AAO57416.1 AAO57416.1 AAO57892.1 AAO57892.1 lptC lptC AAO53885.1 AAO53885.1 AAO55216.1 AAO55216.1 AAO58417.1 AAO58417.1 AAO57916.1 AAO57916.1 AAO56251.1 AAO56251.1 zipA zipA AAO57413.1 AAO57413.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO57415.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (187 aa)    
Predicted Functional Partners:
AAO57416.1
Identified by match to PFAM protein family HMM PF00578; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00578.
  
    0.831
AAO57892.1
STAS domain protein; See PMID:20190049 for expression data; similar to GP:4336802; identified by sequence similarity; putative.
  
     0.700
lptC
Conserved protein of unknown function; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
  
     0.605
AAO53885.1
Endonuclease/exonuclease/phosphatase family protein; See PMID:20190049 for expression data; similar to GP:9106456; identified by sequence similarity; putative.
  
     0.601
AAO55216.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.594
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.590
AAO57916.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02774.
  
     0.587
AAO56251.1
Conserved hypothetical protein; Similar to GP:9948600; identified by sequence similarity; putative.
  
     0.584
zipA
Cell division protein ZipA, putative; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.580
AAO57413.1
Lipoprotein, putative; See PMID:20190049 for expression data.
 
    0.579
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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