Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO54732.1 | AAO57443.1 | PSPTO_1205 | PSPTO_3984 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | 0.454 |
| AAO54732.1 | dnaJ | PSPTO_1205 | PSPTO_4504 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | dnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] | 0.403 |
| AAO54732.1 | rmf | PSPTO_1205 | PSPTO_2310 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Ribosome modulation factor-related protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.804 |
| AAO54732.1 | rplO | PSPTO_1205 | PSPTO_0645 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.716 |
| AAO54732.1 | rpmE-2 | PSPTO_1205 | PSPTO_5136 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Ribosomal protein L31; Binds the 23S rRNA. | 0.579 |
| AAO54732.1 | rpmJ | PSPTO_1205 | PSPTO_0647 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Ribosomal protein L36; See PMID:20190049 for expression data; similar to SP:P21194; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL36 family. | 0.692 |
| AAO54732.1 | rpsL | PSPTO_1205 | PSPTO_0621 | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.713 |
| AAO56444.1 | AAO57443.1 | PSPTO_2952 | PSPTO_3984 | Glycosidase, putative; Similar to GP:6724082, and SP:O06458; identified by sequence similarity; putative. | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | 0.472 |
| AAO57443.1 | AAO54732.1 | PSPTO_3984 | PSPTO_1205 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | 0.454 |
| AAO57443.1 | AAO56444.1 | PSPTO_3984 | PSPTO_2952 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Glycosidase, putative; Similar to GP:6724082, and SP:O06458; identified by sequence similarity; putative. | 0.472 |
| AAO57443.1 | dnaJ | PSPTO_3984 | PSPTO_4504 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | dnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] | 0.456 |
| AAO57443.1 | fliC | PSPTO_3984 | PSPTO_1949 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.730 |
| AAO57443.1 | rmf | PSPTO_3984 | PSPTO_2310 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosome modulation factor-related protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.506 |
| AAO57443.1 | rplO | PSPTO_3984 | PSPTO_0645 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.423 |
| AAO57443.1 | rpmE-2 | PSPTO_3984 | PSPTO_5136 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosomal protein L31; Binds the 23S rRNA. | 0.422 |
| AAO57443.1 | rpmJ | PSPTO_3984 | PSPTO_0647 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosomal protein L36; See PMID:20190049 for expression data; similar to SP:P21194; identified by sequence similarity; putative; Belongs to the bacterial ribosomal protein bL36 family. | 0.429 |
| AAO57443.1 | rpsL | PSPTO_3984 | PSPTO_0621 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.449 |
| AAO57443.1 | tuf | PSPTO_3984 | PSPTO_0624 | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.674 |
| dnaJ | AAO54732.1 | PSPTO_4504 | PSPTO_1205 | dnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] | Ribosomal subunit interface protein, putative; Identified by match to PFAM protein family HMM PF02482; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02482. | 0.403 |
| dnaJ | AAO57443.1 | PSPTO_4504 | PSPTO_3984 | dnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] | Cold shock domain family protein; See PMID:20190049 for expression data; similar to SP:P80415; identified by sequence similarity; putative. | 0.456 |
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