STRINGSTRING
oprD oprD AAO58003.1 AAO58003.1 AAO58417.1 AAO58417.1 AAO55736.1 AAO55736.1 AAO57353.1 AAO57353.1 AAO57325.1 AAO57325.1 proS proS AAO58717.1 AAO58717.1 AAO55811.1 AAO55811.1 AAO56986.1 AAO56986.1 AAO54724.1 AAO54724.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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Textmining
[Homology]
Score
oprDPorin D; Similar to SP:P32722, and SP:P32722; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P32722, and SP:P3272, identified by sequence similarity, putative. (448 aa)    
Predicted Functional Partners:
AAO58003.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GB:L32093, SP:P43468, PID:475110, and PID:475967; identified by sequence similarity; putative.
  
     0.624
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.568
AAO55736.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.550
AAO57353.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.531
AAO57325.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.527
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
       0.502
AAO58717.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.501
AAO55811.1
Membrane protein, putative; See PMID:20190049 for expression data.
  
     0.476
AAO56986.1
Cell division inhibitor, putative; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.462
AAO54724.1
Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...]
  
     0.460
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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