STRINGSTRING
AAO57478.1 AAO57478.1 AAO57480.1 AAO57480.1 AAO57479.1 AAO57479.1 AAO57477.1 AAO57477.1 rsuA rsuA efp efp cmk cmk AAO55333.1 AAO55333.1 AAO53633.1 AAO53633.1 xthA xthA engA engA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57478.1S4 domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01479. (236 aa)    
Predicted Functional Partners:
AAO57480.1
Conserved hypothetical protein; Similar to SP:O68638, and SP:Q9RPT0; identified by sequence similarity; putative.
  
    0.606
AAO57479.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:15979249; identified by sequence similarity; putative.
       0.594
AAO57477.1
Acetyltransferase, GNAT family; Similar to GB:M23419, GB:U17969, SP:P10159, PID:181997, and PID:602245; identified by sequence similarity; putative.
       0.583
rsuA
Ribosomal small subunit pseudouridine synthase A; Similar to SP:P33918, GB:L11669, PID:1130693, and PID:307502; identified by sequence similarity; putative; Belongs to the pseudouridine synthase RsuA family.
  
     0.563
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
 
   
 0.524
cmk
Cytidylate kinase; See PMID:20190049 for expression data.
  
  
 0.506
AAO55333.1
Conserved hypothetical protein TIGR00281; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.467
AAO53633.1
Exodeoxyribonuclease III, putative; See PMID:20190049 for expression data; similar to SP:P37454; identified by sequence similarity; putative.
  
    0.464
xthA
Exodeoxyribonuclease III; See PMID:20190049 for expression data.
  
    0.464
engA
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.459
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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