STRINGSTRING
fnr-1 fnr-1 fnr-2 fnr-2 AAO57482.1 AAO57482.1 rubA rubA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
fnr-1ferredoxin--NADP reductase; Similar to SP:Q44532, and SP:Q44532; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q44532, and SP:Q4453, identified by sequence similarity, putative. (259 aa)    
Predicted Functional Partners:
fnr-2
ferredoxin--NADP reductase; See PMID:20190049 for expression data.
  
  
 
0.909
AAO57482.1
Transcriptional regulator, LysR family; See PMID:20190049 for expression data; similar to GB:X61072, and PID:33512; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
 
   
 0.674
rubA
Rubredoxin; See PMID:20190049 for expression data.
  
  
 0.473
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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