STRINGSTRING
AAO57571.1 AAO57571.1 AAO55846.1 AAO55846.1 ADD52989.1 ADD52989.1 bamA bamA AAO56659.1 AAO56659.1 AAO57413.1 AAO57413.1 AAO55845.1 AAO55845.1 AAO57573.1 AAO57573.1 pdxH pdxH AAO59004.1 AAO59004.1 AAO58767.1 AAO58767.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AAO57571.1Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. (154 aa)    
Predicted Functional Partners:
AAO55846.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
    0.670
ADD52989.1
Conserved protein of unknown function; PMID:20190049.
  
  
 0.666
bamA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.596
AAO56659.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.579
AAO57413.1
Lipoprotein, putative; See PMID:20190049 for expression data.
  
  
 0.564
AAO55845.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
    0.561
AAO57573.1
ompA family protein; Identified by match to PFAM protein family HMM PF00691.
 
  
 0.541
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.534
AAO59004.1
Conserved hypothetical protein; Similar to GP:5714597, and GP:5714597; identified by sequence similarity; putative.
  
     0.517
AAO58767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.511
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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