Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO54808.1 | AAO57573.1 | PSPTO_1284 | PSPTO_4117 | TonB-dependent outer membrane heme receptor; See PMID:20190049 for expression data. | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | 0.493 |
| AAO55063.1 | AAO57571.1 | PSPTO_1543 | PSPTO_4115 | Outer membrane protein OmpH, putative; See PMID:20190049 for expression data. | Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. | 0.498 |
| AAO55063.1 | AAO57573.1 | PSPTO_1543 | PSPTO_4117 | Outer membrane protein OmpH, putative; See PMID:20190049 for expression data. | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | 0.495 |
| AAO55063.1 | pal | PSPTO_1543 | PSPTO_3971 | Outer membrane protein OmpH, putative; See PMID:20190049 for expression data. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.464 |
| AAO55503.1 | AAO57573.1 | PSPTO_1985 | PSPTO_4117 | motB protein; See PMID:20190049 for expression data; similar to GP:2853603; identified by sequence similarity; putative. | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | 0.449 |
| AAO55503.1 | AAO57612.1 | PSPTO_1985 | PSPTO_4156 | motB protein; See PMID:20190049 for expression data; similar to GP:2853603; identified by sequence similarity; putative. | Sodium-type flagellar protein MotY, putative; See PMID:20190049 for expression data; similar to GP:9949675, and SP:P46233; identified by sequence similarity; putative. | 0.424 |
| AAO57571.1 | AAO55063.1 | PSPTO_4115 | PSPTO_1543 | Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. | Outer membrane protein OmpH, putative; See PMID:20190049 for expression data. | 0.498 |
| AAO57571.1 | AAO57573.1 | PSPTO_4115 | PSPTO_4117 | Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | 0.541 |
| AAO57571.1 | pdxH | PSPTO_4115 | PSPTO_4116 | Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.534 |
| AAO57573.1 | AAO54808.1 | PSPTO_4117 | PSPTO_1284 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | TonB-dependent outer membrane heme receptor; See PMID:20190049 for expression data. | 0.493 |
| AAO57573.1 | AAO55063.1 | PSPTO_4117 | PSPTO_1543 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Outer membrane protein OmpH, putative; See PMID:20190049 for expression data. | 0.495 |
| AAO57573.1 | AAO55503.1 | PSPTO_4117 | PSPTO_1985 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | motB protein; See PMID:20190049 for expression data; similar to GP:2853603; identified by sequence similarity; putative. | 0.449 |
| AAO57573.1 | AAO57571.1 | PSPTO_4117 | PSPTO_4115 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Lipoprotein SlyB, putative; Similar to SP:Q53549; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q53549, identified by sequence similarity, putative. | 0.541 |
| AAO57573.1 | AAO57574.1 | PSPTO_4117 | PSPTO_4118 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| AAO57573.1 | AAO57612.1 | PSPTO_4117 | PSPTO_4156 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Sodium-type flagellar protein MotY, putative; See PMID:20190049 for expression data; similar to GP:9949675, and SP:P46233; identified by sequence similarity; putative. | 0.551 |
| AAO57573.1 | pal | PSPTO_4117 | PSPTO_3971 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.504 |
| AAO57573.1 | pdxH | PSPTO_4117 | PSPTO_4116 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.477 |
| AAO57573.1 | rpmI | PSPTO_4117 | PSPTO_2380 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | Ribosomal protein L35; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bL35 family. | 0.429 |
| AAO57573.1 | tolB | PSPTO_4117 | PSPTO_3972 | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.538 |
| AAO57574.1 | AAO57573.1 | PSPTO_4118 | PSPTO_4117 | Hypothetical protein; Identified by Glimmer2; putative. | ompA family protein; Identified by match to PFAM protein family HMM PF00691. | 0.572 |
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