STRINGSTRING
AAO57586.1 AAO57586.1 AAO57585.1 AAO57585.1 AAO57892.1 AAO57892.1 AAO57674.1 AAO57674.1 AAO58937.1 AAO58937.1 AAO57413.1 AAO57413.1 AAO58408.1 AAO58408.1 AAO58417.1 AAO58417.1 AAO57880.1 AAO57880.1 AAO54724.1 AAO54724.1 AAO54525.1 AAO54525.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57586.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (164 aa)    
Predicted Functional Partners:
AAO57585.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
   
 0.768
AAO57892.1
STAS domain protein; See PMID:20190049 for expression data; similar to GP:4336802; identified by sequence similarity; putative.
  
     0.673
AAO57674.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.632
AAO58937.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9951865; identified by sequence similarity; putative.
  
     0.593
AAO57413.1
Lipoprotein, putative; See PMID:20190049 for expression data.
  
     0.561
AAO58408.1
Oxidoreductase, FAD-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01266.
  
     0.542
AAO58417.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585.
  
     0.540
AAO57880.1
Conserved protein of unknown function; Similar to GP:9950675; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:9950675, identified by sequence similarity, putative.
  
     0.537
AAO54724.1
Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...]
  
     0.532
AAO54525.1
Conserved hypothetical protein.
  
     0.519
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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