STRINGSTRING
AAO57627.1 AAO57627.1 AAO57629.1 AAO57629.1 AAO57628.1 AAO57628.1 AAO57630.1 AAO57630.1 AAO57631.1 AAO57631.1 AAO56408.1 AAO56408.1 AAO56407.1 AAO56407.1 AAO56406.1 AAO56406.1 AAO56132.1 AAO56132.1 prpC prpC gltA gltA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57627.1Amino acid ABC transporter, periplasmic amino acid-binding protein; See PMID:20190049 for expression data. (308 aa)    
Predicted Functional Partners:
AAO57629.1
Amino acid ABC transporter, permease protein; See PMID:20190049 for expression data.
 
 0.993
AAO57628.1
Amino acid ABC transporter, permease protein; See PMID:20190049 for expression data.
 
 0.991
AAO57630.1
Amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data.
 0.986
AAO57631.1
Sensor histidine kinase; See PMID:20190049 for expression data.
 
   
 0.882
AAO56408.1
Glutamine ABC transporter, permease protein.
 
 
 0.600
AAO56407.1
Glutamine ABC transporter, permease protein.
 
 
 0.515
AAO56406.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.470
AAO56132.1
Amino acid ABC transporter, permease protein.
 
 
 0.462
prpC
2-methylcitrate synthase; See PMID:20190049 for expression data; Belongs to the citrate synthase family.
   
  
 0.461
gltA
Citrate synthase I; Similar to PIR:A33596; identified by sequence similarity; putative; Belongs to the citrate synthase family.
   
  
 0.458
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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