STRINGSTRING
AAO57674.1 AAO57674.1 rnc rnc era era AAO57585.1 AAO57585.1 recO recO AAO57586.1 AAO57586.1 pilP pilP AAO57771.1 AAO57771.1 AAO55765.1 AAO55765.1 lepB lepB AAO54514.1 AAO54514.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO57674.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (125 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.814
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.804
AAO57585.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.761
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.679
AAO57586.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.632
pilP
Type IV pilus biogenesis protein PilP; See PMID:20190049 for expression data; similar to GB:M86917, SP:P22059, and PID:189403; identified by sequence similarity; putative.
  
   
 0.596
AAO57771.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.587
AAO55765.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P11430, SP:P16529, GB:S51490, GB:D00217, and PID:262707; identified by sequence similarity; putative.
  
     0.571
lepB
Signal peptidase I; See PMID:20190049 for expression data; similar to SP:P26844; identified by sequence similarity; putative; Belongs to the peptidase S26 family.
  
    0.566
AAO54514.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.560
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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