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catF catF fadB fadB catJ catJ catI catI AAO54286.1 AAO54286.1 phbA-2 phbA-2 fadA fadA phbA-1 phbA-1 AAO56648.1 AAO56648.1 AAO56437.1 AAO56437.1 AAO57967.1 AAO57967.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
catF3-oxoadipyl-CoA thiolase; See PMID:20190049 for expression data; similar to GP:17736947; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)    
Predicted Functional Partners:
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 0.996
catJ
3-oxoadipate:succinyl-CoA transferase, subunit B; See PMID:20190049 for expression data; similar to GP:17736946; identified by sequence similarity; putative.
 
 
 0.933
catI
3-oxoadipate:succinyl-CoA transferase, subunit A; See PMID:20190049 for expression data; similar to GP:15141387, and GP:17736945; identified by sequence similarity; putative.
 
 
 0.933
AAO54286.1
Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.921
phbA-2
acetyl-CoA acetyltransferase; See PMID:20190049 for expression data; similar to SP:P45359; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.917
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
  
 
0.910
phbA-1
acetyl-CoA acetyltransferase; See PMID:20190049 for expression data; similar to GP:14717372, and SP:P45359; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.909
AAO56648.1
enoyl-CoA hydratase/isomerase family protein; See PMID:20190049 for expression data; similar to SP:Q52995; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.680
AAO56437.1
P-hydroxycinnamoyl CoA hydratase/lyase; See PMID:20190049 for expression data; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.652
AAO57967.1
This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...]
  
 
 0.588
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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