STRINGSTRING
catJ catJ catI catI catF catF AAO57974.1 AAO57974.1 amdA amdA AAO56930.1 AAO56930.1 pcaR pcaR fadB fadB pcaC-1 pcaC-1 AAO56625.1 AAO56625.1 pcaT pcaT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catJ3-oxoadipate:succinyl-CoA transferase, subunit B; See PMID:20190049 for expression data; similar to GP:17736946; identified by sequence similarity; putative. (259 aa)    
Predicted Functional Partners:
catI
3-oxoadipate:succinyl-CoA transferase, subunit A; See PMID:20190049 for expression data; similar to GP:15141387, and GP:17736945; identified by sequence similarity; putative.
 0.999
catF
3-oxoadipyl-CoA thiolase; See PMID:20190049 for expression data; similar to GP:17736947; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.933
AAO57974.1
6-aminohexanoate-cyclic-dimer hydrolase, putative; Similar to SP:P13397, GB:U03161, SP:P42512, and PID:454353; identified by sequence similarity; putative; Belongs to the amidase family.
    
  0.901
amdA
Amidase; Similar to SP:P22984, GB:M55150, SP:P16930, PID:182393, and PID:31291; identified by sequence similarity; putative; Belongs to the amidase family.
     
  0.900
AAO56930.1
3-oxoacid CoA-transferase, subunit A family; See PMID:20190049 for expression data.
  
 
 0.848
pcaR
Pca regulon regulatory protein PcaR; See PMID:20190049 for expression data; similar to GP:6646870, and SP:Q52154; identified by sequence similarity; putative.
 
  
 0.695
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.655
pcaC-1
4-carboxymuconolactone decarboxylase; See PMID:20190049 for expression data.
 
  
 0.648
AAO56625.1
3-oxoadipate enol-lactone hydrolase; See PMID:20190049 for expression data; similar to GP:17736948; identified by sequence similarity; putative.
 
  
 0.638
pcaT
Dicarboxylic acid transport protein; See PMID:20190049 for expression data.
  
    0.613
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.