STRINGSTRING
AAO57895.1 AAO57895.1 AAO57894.1 AAO57894.1 AAO57896.1 AAO57896.1 AAO57893.1 AAO57893.1 AAO57892.1 AAO57892.1 AAO57901.1 AAO57901.1 AAO57897.1 AAO57897.1 AAO54448.1 AAO54448.1 AAO55481.1 AAO55481.1 AAO55635.1 AAO55635.1 AAO54797.1 AAO54797.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57895.1Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00056. (265 aa)    
Predicted Functional Partners:
AAO57894.1
Mce-related protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02470.
 
 0.999
AAO57896.1
Toluene tolerance ABC transporter, ATP-binding protein, putative; See PMID:20190049 for expression data; similar to GP:4336798; identified by sequence similarity; putative.
 
 0.999
AAO57893.1
Toluene tolerance protein, putative; Similar to GP:4336801, and GP:4336801; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:4336801, and GP:4336801, identified by sequence similarity, putative.
  
 
 0.966
AAO57892.1
STAS domain protein; See PMID:20190049 for expression data; similar to GP:4336802; identified by sequence similarity; putative.
  
 0.961
AAO57901.1
ABC transporter, ATP-binding protein; Identified by match to TIGR protein family HMM TIGR01186; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01186.
 
  
  0.716
AAO57897.1
Sugar isomerase, KpsF/GutQ; See PMID:20190049 for expression data; similar to GP:9950693; identified by sequence similarity; putative.
 
     0.612
AAO54448.1
STAS domain protein; See PMID:20190049 for expression data; similar to GB:U05325, GB:U05337, and PID:496991; identified by sequence similarity; putative.
   
   0.607
AAO55481.1
STAS domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01740.
   
   0.607
AAO55635.1
Anti-anti-sigma factor, putative; See PMID:20190049 for expression data.
   
   0.607
AAO54797.1
Membrane protein, putative; See PMID:20190049 for expression data.
 
  
 0.583
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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