rpoN protein (Pseudomonas syringae tomato) - STRING interaction network

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rpoN

RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (497 aa)

Predicted Functional Partners:

pilR

0.953

pilS

0.904

AAO56054.1

0.879

hrpR

0.878

rpoA

0.875

fleQ

0.872

ntrC

0.869

hrpS

0.863

rpoB

0.841

rpoC

0.835

Your Current Organism:

Pseudomonas syringae tomato

NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAO56054.1	rpoN	PSPTO_2549	PSPTO_4453	Sigma-54 dependent transcriptional regulator; Identified by match to TIGR protein family HMM TIGR01817.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.879
fleQ	rpoN	PSPTO_1954	PSPTO_4453	Transcriptional regulator FleQ; See PMID:20190049 for expression data; similar to GP:1100229; identified by sequence similarity; putative.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.872
hrpR	hrpS	PSPTO_1379	PSPTO_1380	Type III transcriptional regulator HrpR; See PMID:20190049 for expression data; similar to GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity; putative.	Type III transcriptional regulator HrpS; See PMID:20190049 for expression data; similar to GP:639829, and GP:639829; identified by sequence similarity; putative.	0.780
hrpR	rpoN	PSPTO_1379	PSPTO_4453	Type III transcriptional regulator HrpR; See PMID:20190049 for expression data; similar to GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity; putative.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.878
hrpS	hrpR	PSPTO_1380	PSPTO_1379	Type III transcriptional regulator HrpS; See PMID:20190049 for expression data; similar to GP:639829, and GP:639829; identified by sequence similarity; putative.	Type III transcriptional regulator HrpR; See PMID:20190049 for expression data; similar to GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity; putative.	0.780
hrpS	rpoN	PSPTO_1380	PSPTO_4453	Type III transcriptional regulator HrpS; See PMID:20190049 for expression data; similar to GP:639829, and GP:639829; identified by sequence similarity; putative.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.863
ntrC	rpoN	PSPTO_0352	PSPTO_4453	Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.869
pilR	pilS	PSPTO_0823	PSPTO_0824	Type 4 fimbriae expression regulatory protein pilR; See PMID:20190049 for expression data.	Sensor protein PilS.	0.996
pilR	rpoN	PSPTO_0823	PSPTO_4453	Type 4 fimbriae expression regulatory protein pilR; See PMID:20190049 for expression data.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.953
pilS	pilR	PSPTO_0824	PSPTO_0823	Sensor protein PilS.	Type 4 fimbriae expression regulatory protein pilR; See PMID:20190049 for expression data.	0.996
pilS	rpoN	PSPTO_0824	PSPTO_4453	Sensor protein PilS.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.904
rpoA	rpoB	PSPTO_0651	PSPTO_0619	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	PSPTO_0651	PSPTO_0620	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoN	PSPTO_0651	PSPTO_4453	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.875
rpoB	rpoA	PSPTO_0619	PSPTO_0651	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	PSPTO_0619	PSPTO_0620	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoN	PSPTO_0619	PSPTO_4453	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.841
rpoC	rpoA	PSPTO_0620	PSPTO_0651	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	PSPTO_0620	PSPTO_0619	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoN	PSPTO_0620	PSPTO_4453	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.835

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