STRINGSTRING
AAO57928.1 AAO57928.1 sfcA sfcA AAO58561.1 AAO58561.1 AAO57929.1 AAO57929.1 AAO56590.1 AAO56590.1 AAO58185.1 AAO58185.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57928.1Membrane protein, putative; Similar to GP:15980841; identified by sequence similarity; putative. (316 aa)    
Predicted Functional Partners:
sfcA
Malate dehydrogenase; Similar to SP:P26616; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P26616, identified by sequence similarity, putative; Belongs to the malic enzymes family.
  
  
 0.684
AAO58561.1
Malic enzyme family protein; See PMID:20190049 for expression data.
  
  
 0.684
AAO57929.1
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to TIGR protein family HMM TIGR01409.
       0.530
AAO56590.1
Transcriptional regulator, putative; Similar to GP:1184831; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:1184831, identified by sequence similarity, putative.
  
     0.406
AAO58185.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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