STRINGSTRING
AAO58108.1 AAO58108.1 htpG htpG AAO54070.1 AAO54070.1 AAO58501.1 AAO58501.1 AAO53573.1 AAO53573.1 AAO55180.1 AAO55180.1 AAO54061.1 AAO54061.1 AAO55947.1 AAO55947.1 AAO56499.1 AAO56499.1 AAO58107.1 AAO58107.1 AAO58109.1 AAO58109.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO58108.1Histone deacetylase family protein. (305 aa)    
Predicted Functional Partners:
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.866
AAO54070.1
Hypothetical protein; Identified by Glimmer2; putative.
    
 0.849
AAO58501.1
Amine oxidase, flavin-containing protein; See PMID:20190049 for expression data.
  
 
 0.649
AAO53573.1
helicase/SNF2 family domain protein; Similar to GB:M65060, SP:P26921, PID:149749, and GB:AE000666; identified by sequence similarity; putative.
  
 
 0.608
AAO55180.1
helicase/SNF2 family domain protein; See PMID:20190049 for expression data; similar to GB:M65060, SP:P26921, PID:149749, and GB:AE000666; identified by sequence similarity; putative.
  
 
 0.600
AAO54061.1
Tryptophan 2-monooxygenase, putative; See PMID:20190049 for expression data.
    
 0.592
AAO55947.1
Amine oxidase, flavin-containing protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01494.
    
 0.592
AAO56499.1
Amine oxidase, flavin-containing protein; Similar to GB:M79446, SP:P24182, GB:M83198, PID:145175, PID:145893, PID:145896, PID:606196, GB:U00096, and PID:1789654; identified by sequence similarity; putative.
    
 0.592
AAO58107.1
Acetyltransferase, GNAT family.
     
 0.588
AAO58109.1
Conserved hypothetical protein.
       0.588
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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