Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53939.1 | AAO55160.1 | PSPTO_0395 | PSPTO_1640 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Uses inorganic polyphosphate (polyP) as a donor to convert AMP to ADP. Can also convert GMP to GDP, with lower efficiency. Belongs to the polyphosphate kinase 2 (PPK2) family. Class II subfamily. | 0.604 |
| AAO53939.1 | AAO58356.1 | PSPTO_0395 | PSPTO_4928 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.930 |
| AAO55160.1 | AAO53939.1 | PSPTO_1640 | PSPTO_0395 | Conserved hypothetical protein; Uses inorganic polyphosphate (polyP) as a donor to convert AMP to ADP. Can also convert GMP to GDP, with lower efficiency. Belongs to the polyphosphate kinase 2 (PPK2) family. Class II subfamily. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.604 |
| AAO55160.1 | AAO58356.1 | PSPTO_1640 | PSPTO_4928 | Conserved hypothetical protein; Uses inorganic polyphosphate (polyP) as a donor to convert AMP to ADP. Can also convert GMP to GDP, with lower efficiency. Belongs to the polyphosphate kinase 2 (PPK2) family. Class II subfamily. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.675 |
| AAO58356.1 | AAO53939.1 | PSPTO_4928 | PSPTO_0395 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.930 |
| AAO58356.1 | AAO55160.1 | PSPTO_4928 | PSPTO_1640 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | Conserved hypothetical protein; Uses inorganic polyphosphate (polyP) as a donor to convert AMP to ADP. Can also convert GMP to GDP, with lower efficiency. Belongs to the polyphosphate kinase 2 (PPK2) family. Class II subfamily. | 0.675 |
| AAO58356.1 | AAO58359.1 | PSPTO_4928 | PSPTO_4931 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | Membrane protein, putative; See PMID:20190049 for expression data. | 0.402 |
| AAO58356.1 | dnaB | PSPTO_4928 | PSPTO_4929 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.556 |
| AAO58356.1 | rplI | PSPTO_4928 | PSPTO_4930 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.417 |
| AAO58356.1 | ubiA | PSPTO_4928 | PSPTO_5476 | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.409 |
| AAO58359.1 | AAO58356.1 | PSPTO_4931 | PSPTO_4928 | Membrane protein, putative; See PMID:20190049 for expression data. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.402 |
| AAO58359.1 | dnaB | PSPTO_4931 | PSPTO_4929 | Membrane protein, putative; See PMID:20190049 for expression data. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.528 |
| AAO58359.1 | rplI | PSPTO_4931 | PSPTO_4930 | Membrane protein, putative; See PMID:20190049 for expression data. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.912 |
| dnaB | AAO58356.1 | PSPTO_4929 | PSPTO_4928 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.556 |
| dnaB | AAO58359.1 | PSPTO_4929 | PSPTO_4931 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Membrane protein, putative; See PMID:20190049 for expression data. | 0.528 |
| dnaB | rplI | PSPTO_4929 | PSPTO_4930 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.748 |
| rplI | AAO58356.1 | PSPTO_4930 | PSPTO_4928 | Ribosomal protein L9; Binds to the 23S rRNA. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.417 |
| rplI | AAO58359.1 | PSPTO_4930 | PSPTO_4931 | Ribosomal protein L9; Binds to the 23S rRNA. | Membrane protein, putative; See PMID:20190049 for expression data. | 0.912 |
| rplI | dnaB | PSPTO_4930 | PSPTO_4929 | Ribosomal protein L9; Binds to the 23S rRNA. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.748 |
| ubiA | AAO58356.1 | PSPTO_5476 | PSPTO_4928 | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | Radical SAM domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04055. | 0.409 |