Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO56918.1 | AAO56924.1 | PSPTO_3443 | PSPTO_3449 | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | 0.986 |
| AAO56918.1 | AAO58414.1 | PSPTO_3443 | PSPTO_4986 | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | 0.570 |
| AAO56924.1 | AAO56918.1 | PSPTO_3449 | PSPTO_3443 | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | 0.986 |
| AAO56924.1 | AAO58414.1 | PSPTO_3449 | PSPTO_4986 | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | 0.850 |
| AAO56924.1 | AAO58416.1 | PSPTO_3449 | PSPTO_4988 | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.502 |
| AAO56924.1 | AAO58419.1 | PSPTO_3449 | PSPTO_4991 | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data. | 0.562 |
| AAO56924.1 | rfaF | PSPTO_3449 | PSPTO_5003 | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | ADP-heptose--LPS heptosyltransferase II; See PMID:20190049 for expression data; similar to SP:P37692, GB:U14003, SP:P39352, PID:537120, GB:U00096, and PID:1790730; identified by sequence similarity; putative. | 0.518 |
| AAO58414.1 | AAO56918.1 | PSPTO_4986 | PSPTO_3443 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Tyrosine-protein kinase; Similar to GP:4512007, and SP:P38134; identified by sequence similarity; putative. | 0.570 |
| AAO58414.1 | AAO56924.1 | PSPTO_4986 | PSPTO_3449 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Capsular polysaccharide biosynthesis protein; Similar to SP:Q48460; identified by sequence similarity; putative. | 0.850 |
| AAO58414.1 | AAO58415.1 | PSPTO_4986 | PSPTO_4987 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Protein of unknown function; See PMID:20190049 for expression data. | 0.932 |
| AAO58414.1 | AAO58416.1 | PSPTO_4986 | PSPTO_4988 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.789 |
| AAO58414.1 | AAO58418.1 | PSPTO_4986 | PSPTO_4990 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.569 |
| AAO58414.1 | AAO58419.1 | PSPTO_4986 | PSPTO_4991 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data. | 0.753 |
| AAO58414.1 | AAO58420.1 | PSPTO_4986 | PSPTO_4992 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Carbamoyltransferase family protein; See PMID:20190049 for expression data. | 0.723 |
| AAO58414.1 | AAO58421.1 | PSPTO_4986 | PSPTO_4993 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Hypothetical protein; This gene is disrupted by an IS element insertion, interruption-N; known as holPtoAC (PMID12615215; Greenberg and Vinatzer, 2003) or HopAC (PMID15828679; Lindeberg et al, 2005); not a type III effector. | 0.582 |
| AAO58414.1 | hldE | PSPTO_4986 | PSPTO_4983 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Lipopolysaccharide biosynthesis protein RfaE; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.610 |
| AAO58414.1 | rfaF | PSPTO_4986 | PSPTO_5003 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | ADP-heptose--LPS heptosyltransferase II; See PMID:20190049 for expression data; similar to SP:P37692, GB:U14003, SP:P39352, PID:537120, GB:U00096, and PID:1790730; identified by sequence similarity; putative. | 0.615 |
| AAO58415.1 | AAO58414.1 | PSPTO_4987 | PSPTO_4986 | Protein of unknown function; See PMID:20190049 for expression data. | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | 0.932 |
| AAO58415.1 | AAO58416.1 | PSPTO_4987 | PSPTO_4988 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.766 |
| AAO58415.1 | AAO58418.1 | PSPTO_4987 | PSPTO_4990 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.571 |
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