STRINGSTRING
AAO58417.1 AAO58417.1 AAO58419.1 AAO58419.1 AAO58418.1 AAO58418.1 AAO58420.1 AAO58420.1 AAO57353.1 AAO57353.1 algK algK AAO58387.1 AAO58387.1 AAO58744.1 AAO58744.1 algG algG AAO55141.1 AAO55141.1 AAO54724.1 AAO54724.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO58417.1Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585. (478 aa)    
Predicted Functional Partners:
AAO58419.1
Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data.
 
  
 0.853
AAO58418.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
  
 0.847
AAO58420.1
Carbamoyltransferase family protein; See PMID:20190049 for expression data.
 
   
 0.833
AAO57353.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
   
 0.766
algK
Alginate biosynthesis protein AlgK; May be involved in the polymerization of mannuronate to alginate.
  
    0.758
AAO58387.1
Lipoprotein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03886.
  
     0.756
AAO58744.1
Outer membrane porin, OprD family; Identified by match to PFAM protein family HMM PF03573; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03573.
  
     0.753
algG
Alginate biosynthesis protein AlgG; Catalyzes the epimerization of beta-D-mannuronate to alpha-L- guluronate during the synthesis of the linear polysaccharide alginate. In addition, is part of a periplasmic protein complex that protects alginate from degradation by AlgL by channeling the newly formed alginate polymer through a scaffold that transfers the alginate polymer through the periplasmic space to the outer membrane secretin AlgE (By similarity).
 
     0.752
AAO55141.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
  
     0.749
AAO54724.1
Conserved protein of unknown function; Similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L46362, GB:L48713, GB:L48715, GB:L48716, SP:P07902, PID:1066737, PID:1066749, PID:1066751, PID:1066753, PID:182951, PID:306759, PID:950351, PID:950353, PID:950355, PID:950357, PID:950365, PID:950367, PID:950369, PID:950377, PID:950381, PID:950383, PID:950391, PID:950393, PID:950395, PID:950397, PID:950399, PID:950401, PID:950403, and PID:950405; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:M60091, GB:L46359, GB:L46360, GB:L46361, GB:L4636 [...]
  
     0.747
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.