Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO58414.1 | AAO58415.1 | PSPTO_4986 | PSPTO_4987 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Protein of unknown function; See PMID:20190049 for expression data. | 0.932 |
| AAO58414.1 | AAO58416.1 | PSPTO_4986 | PSPTO_4988 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.789 |
| AAO58414.1 | AAO58417.1 | PSPTO_4986 | PSPTO_4989 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585. | 0.534 |
| AAO58414.1 | AAO58418.1 | PSPTO_4986 | PSPTO_4990 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.569 |
| AAO58414.1 | AAO58419.1 | PSPTO_4986 | PSPTO_4991 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data. | 0.753 |
| AAO58414.1 | AAO58420.1 | PSPTO_4986 | PSPTO_4992 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Carbamoyltransferase family protein; See PMID:20190049 for expression data. | 0.723 |
| AAO58414.1 | AAO58421.1 | PSPTO_4986 | PSPTO_4993 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Hypothetical protein; This gene is disrupted by an IS element insertion, interruption-N; known as holPtoAC (PMID12615215; Greenberg and Vinatzer, 2003) or HopAC (PMID15828679; Lindeberg et al, 2005); not a type III effector. | 0.582 |
| AAO58414.1 | AAO58425.1 | PSPTO_4986 | PSPTO_4997 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.403 |
| AAO58414.1 | AAO58426.1 | PSPTO_4986 | PSPTO_4998 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | 0.402 |
| AAO58414.1 | waaG | PSPTO_4986 | PSPTO_5001 | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative. | 0.503 |
| AAO58415.1 | AAO58414.1 | PSPTO_4987 | PSPTO_4986 | Protein of unknown function; See PMID:20190049 for expression data. | Membrane protein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01770. | 0.932 |
| AAO58415.1 | AAO58416.1 | PSPTO_4987 | PSPTO_4988 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.766 |
| AAO58415.1 | AAO58417.1 | PSPTO_4987 | PSPTO_4989 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02585. | 0.560 |
| AAO58415.1 | AAO58418.1 | PSPTO_4987 | PSPTO_4990 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.571 |
| AAO58415.1 | AAO58419.1 | PSPTO_4987 | PSPTO_4991 | Protein of unknown function; See PMID:20190049 for expression data. | Glycosyl transferase, group 1 family protein; See PMID:20190049 for expression data. | 0.729 |
| AAO58415.1 | AAO58420.1 | PSPTO_4987 | PSPTO_4992 | Protein of unknown function; See PMID:20190049 for expression data. | Carbamoyltransferase family protein; See PMID:20190049 for expression data. | 0.731 |
| AAO58415.1 | AAO58421.1 | PSPTO_4987 | PSPTO_4993 | Protein of unknown function; See PMID:20190049 for expression data. | Hypothetical protein; This gene is disrupted by an IS element insertion, interruption-N; known as holPtoAC (PMID12615215; Greenberg and Vinatzer, 2003) or HopAC (PMID15828679; Lindeberg et al, 2005); not a type III effector. | 0.578 |
| AAO58415.1 | AAO58425.1 | PSPTO_4987 | PSPTO_4997 | Protein of unknown function; See PMID:20190049 for expression data. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.435 |
| AAO58415.1 | AAO58426.1 | PSPTO_4987 | PSPTO_4998 | Protein of unknown function; See PMID:20190049 for expression data. | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | 0.441 |
| AAO58415.1 | waaG | PSPTO_4987 | PSPTO_5001 | Protein of unknown function; See PMID:20190049 for expression data. | Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative. | 0.436 |
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