Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO58426.1 | AAO58427.1 | PSPTO_4998 | PSPTO_4999 | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | 0.951 |
| AAO58426.1 | glnE | PSPTO_4998 | PSPTO_5004 | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] | 0.548 |
| AAO58426.1 | waaC | PSPTO_4998 | PSPTO_5002 | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | Lipopolysaccharide heptosyltransferase; See PMID:20190049 for expression data; similar to SP:P24173; identified by sequence similarity; putative. | 0.961 |
| AAO58426.1 | waaG | PSPTO_4998 | PSPTO_5001 | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative. | 0.976 |
| AAO58426.1 | waaP | PSPTO_4998 | PSPTO_5000 | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | Lipopolysaccharide core biosynthesis protein WaaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.987 |
| AAO58427.1 | AAO58426.1 | PSPTO_4999 | PSPTO_4998 | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | Lipopolysaccharide biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:4323000; identified by sequence similarity; putative. | 0.951 |
| AAO58427.1 | glnE | PSPTO_4999 | PSPTO_5004 | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] | 0.548 |
| AAO58427.1 | waaC | PSPTO_4999 | PSPTO_5002 | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | Lipopolysaccharide heptosyltransferase; See PMID:20190049 for expression data; similar to SP:P24173; identified by sequence similarity; putative. | 0.868 |
| AAO58427.1 | waaG | PSPTO_4999 | PSPTO_5001 | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | Lipopolysaccharide core biosynthesis protein WaaG; See PMID:20190049 for expression data; similar to GB:X55137; identified by sequence similarity; putative. | 0.948 |
| AAO58427.1 | waaP | PSPTO_4999 | PSPTO_5000 | Lipopolysaccharide core biosynthesis protein, putative; See PMID:20190049 for expression data; similar to GP:3482880; identified by sequence similarity; putative. | Lipopolysaccharide core biosynthesis protein WaaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.950 |
| argA | glnE | PSPTO_0324 | PSPTO_5004 | N-acetylglutamate synthase; See PMID:20190049 for expression data; similar to SP:P08205, GB:M23419, GB:U17969, SP:P10159, PID:181997, and PID:602245; identified by sequence similarity; putative. | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] | 0.554 |
| argA | glnK | PSPTO_0324 | PSPTO_0217 | N-acetylglutamate synthase; See PMID:20190049 for expression data; similar to SP:P08205, GB:M23419, GB:U17969, SP:P10159, PID:181997, and PID:602245; identified by sequence similarity; putative. | Nitrogen regulatory protein P-II; Similar to GP:2735324; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2735324, identified by sequence similarity, putative; Belongs to the P(II) protein family. | 0.756 |
| argA | gltB | PSPTO_0324 | PSPTO_5123 | N-acetylglutamate synthase; See PMID:20190049 for expression data; similar to SP:P08205, GB:M23419, GB:U17969, SP:P10159, PID:181997, and PID:602245; identified by sequence similarity; putative. | Glutamate synthase, large subunit; See PMID:20190049 for expression data. | 0.719 |
| glnA-1 | glnD | PSPTO_0359 | PSPTO_1532 | Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. | [protein-pII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | 0.437 |
| glnA-1 | glnE | PSPTO_0359 | PSPTO_5004 | Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] | 0.644 |
| glnA-1 | glnK | PSPTO_0359 | PSPTO_0217 | Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. | Nitrogen regulatory protein P-II; Similar to GP:2735324; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2735324, identified by sequence similarity, putative; Belongs to the P(II) protein family. | 0.534 |
| glnA-1 | gltB | PSPTO_0359 | PSPTO_5123 | Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. | Glutamate synthase, large subunit; See PMID:20190049 for expression data. | 0.971 |
| glnD | glnA-1 | PSPTO_1532 | PSPTO_0359 | [protein-pII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. | 0.437 |
| glnD | glnE | PSPTO_1532 | PSPTO_5004 | [protein-pII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] | 0.802 |
| glnD | glnK | PSPTO_1532 | PSPTO_0217 | [protein-pII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | Nitrogen regulatory protein P-II; Similar to GP:2735324; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2735324, identified by sequence similarity, putative; Belongs to the P(II) protein family. | 0.888 |
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