STRINGSTRING
pilJ pilJ pilH pilH pilG pilG AAO58458.1 AAO58458.1 pilI pilI AAO58457.1 AAO58457.1 AAO55018.1 AAO55018.1 pilM pilM cheA-1 cheA-1 cheA-2 cheA-2 pilN pilN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
pilJType IV pilus biogenesis protein PilJ; See PMID:20190049 for expression data. (680 aa)    
Predicted Functional Partners:
pilH
Type IV pilus response regulator PilH; See PMID:20190049 for expression data.
 
 0.994
pilG
Type IV pilus response regulator PilG; See PMID:20190049 for expression data.
 
 0.994
AAO58458.1
Sensor histidine kinase/response regulator; See PMID:20190049 for expression data.
 
 0.992
pilI
Type IV pilus protein PilI; See PMID:20190049 for expression data.
 
  0.990
AAO58457.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
 
  0.988
AAO55018.1
Sensor histidine kinase/response regulator; See PMID:20190049 for expression data.
 
 
 0.863
pilM
Type IV pilus biogenesis protein PilM; See PMID:20190049 for expression data.
  
  
 0.804
cheA-1
Chemotaxis sensor histidine kinase CheA; See PMID:20190049 for expression data; similar to SP:P29072, GB:U00020, and PID:467140; identified by sequence similarity; putative.
 
 
 0.792
cheA-2
Chemotaxis sensor histidine kinase CheA; See PMID:20190049 for expression data.
 
 
 0.757
pilN
Type IV pilus biogenesis protein PilN; See PMID:20190049 for expression data.
  
  
 0.734
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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