Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO58464.1 | AAO58465.1 | PSPTO_5036 | PSPTO_5037 | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | 0.615 |
| AAO58464.1 | AAO58466.1 | PSPTO_5036 | PSPTO_5038 | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.620 |
| AAO58464.1 | gshB | PSPTO_5036 | PSPTO_5035 | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | Glutathione synthetase; See PMID:20190049 for expression data. | 0.579 |
| AAO58464.1 | pyrR | PSPTO_5036 | PSPTO_5039 | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | Pyrimidine operon regulatory protein PyrR; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.500 |
| AAO58465.1 | AAO58464.1 | PSPTO_5037 | PSPTO_5036 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | 0.615 |
| AAO58465.1 | AAO58466.1 | PSPTO_5037 | PSPTO_5038 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.938 |
| AAO58465.1 | AAO58469.1 | PSPTO_5037 | PSPTO_5041 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | Dihydroorotase, multifunctional complex type; See PMID:20190049 for expression data. | 0.492 |
| AAO58465.1 | gshB | PSPTO_5037 | PSPTO_5035 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | Glutathione synthetase; See PMID:20190049 for expression data. | 0.611 |
| AAO58465.1 | pyrB | PSPTO_5037 | PSPTO_5040 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | Aspartate carbamoyltransferase; See PMID:20190049 for expression data; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.530 |
| AAO58465.1 | pyrR | PSPTO_5037 | PSPTO_5039 | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | Pyrimidine operon regulatory protein PyrR; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.486 |
| AAO58466.1 | AAO58464.1 | PSPTO_5038 | PSPTO_5036 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | tonB domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03544. | 0.620 |
| AAO58466.1 | AAO58465.1 | PSPTO_5038 | PSPTO_5037 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Conserved protein of unknown function; See PMID:20190049 for expression data; Belongs to the UPF0301 (AlgH) family. | 0.938 |
| AAO58466.1 | AAO58469.1 | PSPTO_5038 | PSPTO_5041 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Dihydroorotase, multifunctional complex type; See PMID:20190049 for expression data. | 0.527 |
| AAO58466.1 | alaS | PSPTO_5038 | PSPTO_1842 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.597 |
| AAO58466.1 | coaD | PSPTO_5038 | PSPTO_0417 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.444 |
| AAO58466.1 | gshB | PSPTO_5038 | PSPTO_5035 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Glutathione synthetase; See PMID:20190049 for expression data. | 0.563 |
| AAO58466.1 | miaA | PSPTO_5038 | PSPTO_4943 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.508 |
| AAO58466.1 | pyrB | PSPTO_5038 | PSPTO_5040 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Aspartate carbamoyltransferase; See PMID:20190049 for expression data; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.530 |
| AAO58466.1 | pyrR | PSPTO_5038 | PSPTO_5039 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Pyrimidine operon regulatory protein PyrR; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. | 0.501 |
| AAO58466.1 | recJ | PSPTO_5038 | PSPTO_1488 | Conserved protein of unknown function; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | single-stranded-DNA-specific exonuclease RecJ. | 0.462 |
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