STRINGSTRING
AAO58481.1 AAO58481.1 AAO58480.1 AAO58480.1 AAO58479.1 AAO58479.1 metW metW metXS metXS AAO55743.1 AAO55743.1 AAO56267.1 AAO56267.1 AAO55441.1 AAO55441.1 fimA fimA AAO54694.1 AAO54694.1 AAO56871.1 AAO56871.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO58481.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (107 aa)    
Predicted Functional Partners:
AAO58480.1
Oxygen-independent coproporphyrinogen III oxidase, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.828
AAO58479.1
Ham1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.786
metW
metW protein; See PMID:20190049 for expression data.
       0.688
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.687
AAO55743.1
Fimbrial protein, putative.
  
     0.662
AAO56267.1
Lipopolysaccharide core biosynthesis domain protein; See PMID:20190049 for expression data; similar to GP:147572, and SP:P27241; identified by sequence similarity; putative.
  
     0.661
AAO55441.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.621
fimA
Type I pilus biogensis protein FimA.
  
     0.613
AAO54694.1
Conserved hypothetical protein; Similar to GP:15024601; identified by sequence similarity; putative.
  
     0.608
AAO56871.1
Tail tape measure protein; Identified by match to TIGR protein family HMM TIGR01760.
  
     0.593
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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