STRINGSTRING
AAO58682.1 AAO58682.1 cynT cynT AAO54862.1 AAO54862.1 AAO54528.1 AAO54528.1 cfa6 cfa6 AAO56084.1 AAO56084.1 nuoM nuoM AAO56946.1 AAO56946.1 sbcD sbcD acpP acpP AAO57967.1 AAO57967.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AAO58682.1Sulfate transporter family protein; See PMID:20190049 for expression data. (510 aa)    
Predicted Functional Partners:
cynT
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.991
AAO54862.1
Carbonic anhydrase; Identified by match to TIGR protein family HMM TIGR01409; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01409.
  
 0.933
AAO54528.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.777
cfa6
Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...]
 
 
 0.725
AAO56084.1
Carbonic anhydrase-related protein; See PMID:20190049 for expression data; similar to GP:6127222, and SP:P40881; identified by sequence similarity; putative.
    
 0.538
nuoM
NADH dehydrogenase I, M subunit; See PMID:20190049 for expression data.
  
 
 0.513
AAO56946.1
Monovalent cation:proton antiporter, putative; Similar to GP:15155444, and GP:1072395; identified by sequence similarity; putative.
  
  
 0.498
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
   0.492
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.474
AAO57967.1
This gene is aparrently the terminal component of a non-ribosomal peptide synthetase (due to the presence of the terminal thioesterase domain) and is most likely associated with the previous gene which appears to be a initiating component. This gene contains three complete amino acid activation, thiolation and condensation domain modules and appears to be specific for glycine, an unidentified amino acid and serine according to the prediction algorithm at http://raynam.chm.jhu.edu/; nrps/index2.html. Taken together these two genes appear to direct the biosynthesis of a previously undesc [...]
 
 
 0.446
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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