STRINGSTRING
AAO58722.1 AAO58722.1 tuf tuf AAO58723.1 AAO58723.1 hemF hemF AAO58721.1 AAO58721.1 mnmC mnmC AAO58724.1 AAO58724.1 AAO56839.1 AAO56839.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AAO58722.1Oxidoreductase, 2OG-Fe(II) oxygenase family; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03171. (244 aa)    
Predicted Functional Partners:
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.620
AAO58723.1
Conserved hypothetical protein.
       0.608
hemF
Coproporphyrinogen III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
  
  
 0.539
AAO58721.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
       0.536
mnmC
Oxidoreductase, FAD-binding protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family.
  
     0.469
AAO58724.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
       0.462
AAO56839.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
 
     0.425
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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