Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO56057.1 | AAO58837.1 | PSPTO_2552 | PSPTO_5415 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | 0.805 |
| AAO56057.1 | AAO58840.1 | PSPTO_2552 | PSPTO_5418 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.826 |
| AAO56057.1 | AAO58841.1 | PSPTO_2552 | PSPTO_5419 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.947 |
| AAO56057.1 | AAO58843.1 | PSPTO_2552 | PSPTO_5421 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative; See PMID:20190049 for expression data. | 0.846 |
| AAO56057.1 | AAO58844.1 | PSPTO_2552 | PSPTO_5422 | Conserved hypothetical protein; Identified by Glimmer2; putative. | FHA domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00498. | 0.841 |
| AAO56057.1 | AAO58847.1 | PSPTO_2552 | PSPTO_5425 | Conserved hypothetical protein; Identified by Glimmer2; putative. | clpB protein, putative; See PMID:20190049 for expression data; Belongs to the ClpA/ClpB family. | 0.680 |
| AAO56057.1 | AAO58848.1 | PSPTO_2552 | PSPTO_5426 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.833 |
| AAO56057.1 | AAO58849.1 | PSPTO_2552 | PSPTO_5427 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.897 |
| AAO56057.1 | AAO58856.1 | PSPTO_2552 | PSPTO_5434 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02912. | 0.778 |
| AAO58837.1 | AAO56057.1 | PSPTO_5415 | PSPTO_2552 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.805 |
| AAO58837.1 | AAO58840.1 | PSPTO_5415 | PSPTO_5418 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.937 |
| AAO58837.1 | AAO58841.1 | PSPTO_5415 | PSPTO_5419 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.968 |
| AAO58837.1 | AAO58842.1 | PSPTO_5415 | PSPTO_5420 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.941 |
| AAO58837.1 | AAO58843.1 | PSPTO_5415 | PSPTO_5421 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Lipoprotein, putative; See PMID:20190049 for expression data. | 0.946 |
| AAO58837.1 | AAO58844.1 | PSPTO_5415 | PSPTO_5422 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | FHA domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00498. | 0.929 |
| AAO58837.1 | AAO58847.1 | PSPTO_5415 | PSPTO_5425 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | clpB protein, putative; See PMID:20190049 for expression data; Belongs to the ClpA/ClpB family. | 0.870 |
| AAO58837.1 | AAO58848.1 | PSPTO_5415 | PSPTO_5426 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.920 |
| AAO58837.1 | AAO58849.1 | PSPTO_5415 | PSPTO_5427 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | 0.937 |
| AAO58837.1 | AAO58856.1 | PSPTO_5415 | PSPTO_5434 | Rhs element Vgr protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01646. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02912. | 0.906 |
| AAO58840.1 | AAO56057.1 | PSPTO_5418 | PSPTO_2552 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.826 |
page 1 of 6