STRINGSTRING
AAO58881.1 AAO58881.1 fadB fadB AAO56648.1 AAO56648.1 AAO56220.1 AAO56220.1 AAO55583.1 AAO55583.1 fadA fadA AAO58880.1 AAO58880.1 sucB sucB AAO56246.1 AAO56246.1 lpdA lpdA AAO57324.1 AAO57324.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO58881.1acyl-CoA dehydrogenase, putative; See PMID:20190049 for expression data; similar to GP:15140733, and SP:P45857; identified by sequence similarity; putative. (393 aa)    
Predicted Functional Partners:
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 0.984
AAO56648.1
enoyl-CoA hydratase/isomerase family protein; See PMID:20190049 for expression data; similar to SP:Q52995; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.980
AAO56220.1
See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.969
AAO55583.1
enoyl-CoA hydratase/isomerase family protein; See PMID:20190049 for expression data.
 
 0.953
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 0.932
AAO58880.1
CAIB/BAIF family protein; Similar to GP:14587414; identified by sequence similarity; putative; Belongs to the CoA-transferase III family.
 
 0.927
sucB
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
 0.910
AAO56246.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data.
 
  
 
0.910
lpdA
2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase; See PMID:20190049 for expression data.
   
 0.906
AAO57324.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data; similar to GP:4902957, and GP:4902957; identified by sequence similarity; putative.
  
  
 
0.905
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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