STRINGSTRING
AAO58882.1 AAO58882.1 AAO55290.1 AAO55290.1 AAO56753.1 AAO56753.1 AAO57147.1 AAO57147.1 AAO56402.1 AAO56402.1 AAO56082.1 AAO56082.1 AAO56800.1 AAO56800.1 AAO55956.1 AAO55956.1 AAO58538.1 AAO58538.1 AAO55397.1 AAO55397.1 AAO54315.1 AAO54315.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO58882.1Transcriptional regulator, LysR family; Similar to GP:15158811; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
AAO55290.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.695
AAO56753.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF01047; Belongs to the LysR transcriptional regulatory family.
  
     0.670
AAO57147.1
Transcriptional regulator, LysR family; Similar to GP:15073695; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.640
AAO56402.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.632
AAO56082.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
  
     0.629
AAO56800.1
Transcriptional regulator, LysR family; Similar to GP:3282335; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.612
AAO55956.1
Transcriptional regulator, LysR family; Identified by match to PFAM protein family HMM PF02954; Belongs to the LysR transcriptional regulatory family.
  
     0.607
AAO58538.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.592
AAO55397.1
Transcriptional regulator, LysR family; See PMID:20190049 for expression data; similar to GP:13937519; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
     0.581
AAO54315.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.576
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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