STRINGSTRING
phoR phoR phoB phoB phoU phoU ompR ompR AAO54814.1 AAO54814.1 pilH pilH AAO54328.1 AAO54328.1 AAO56859.1 AAO56859.1 tctD tctD AAO55199.1 AAO55199.1 colR colR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor protein phoR. (440 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein PhoB; See PMID:20190049 for expression data.
 0.998
phoU
Phosphate transport system protein PhoU; Plays a role in the regulation of phosphate uptake.
 
   
 0.831
ompR
DNA-binding response regulator OmpR; See PMID:20190049 for expression data.
 
 0.829
AAO54814.1
DNA-binding response regulator; See PMID:20190049 for expression data.
 
 0.791
pilH
Type IV pilus response regulator PilH; See PMID:20190049 for expression data.
 
 0.786
AAO54328.1
DNA-binding response regulator; See PMID:20190049 for expression data.
 
 
 0.783
AAO56859.1
DNA-binding response regulator; See PMID:20190049 for expression data.
 
 0.742
tctD
DNA-binding response regulator TctD; See PMID:20190049 for expression data.
 
 0.740
AAO55199.1
Transcriptional regulatory protein PhoP, putative; See PMID:20190049 for expression data.
 
 0.732
colR
DNA-binding response regulator ColR; See PMID:20190049 for expression data.
 
 0.725
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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