Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO58909.1 | algC | PSPTO_5490 | PSPTO_0083 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | 0.906 |
| AAO58909.1 | eda-1 | PSPTO_5490 | PSPTO_1302 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; See PMID:20190049 for expression data. | 0.809 |
| AAO58909.1 | fba | PSPTO_5490 | PSPTO_0390 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.800 |
| AAO58909.1 | glk | PSPTO_5490 | PSPTO_1289 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucokinase; See PMID:20190049 for expression data; Belongs to the bacterial glucokinase family. | 0.905 |
| AAO58909.1 | pgi | PSPTO_5490 | PSPTO_0959 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucose-6-phosphate isomerase; Identified by match to PFAM protein family HMM PF00342; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00342. | 0.912 |
| AAO58909.1 | pgm | PSPTO_5490 | PSPTO_3035 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Phosphoglucomutase, alpha-D-glucose phosphate-specific; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02878. | 0.911 |
| AAO58909.1 | tal | PSPTO_5490 | PSPTO_2119 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.824 |
| AAO58909.1 | tkt | PSPTO_5490 | PSPTO_0385 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.831 |
| AAO58909.1 | zwf-1 | PSPTO_5490 | PSPTO_1300 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.825 |
| AAO58909.1 | zwf-2 | PSPTO_5490 | PSPTO_3121 | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.802 |
| algC | AAO58909.1 | PSPTO_0083 | PSPTO_5490 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Aldose 1-epimerase family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | 0.906 |
| algC | eda-1 | PSPTO_0083 | PSPTO_1302 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; See PMID:20190049 for expression data. | 0.809 |
| algC | fba | PSPTO_0083 | PSPTO_0390 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.869 |
| algC | glk | PSPTO_0083 | PSPTO_1289 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Glucokinase; See PMID:20190049 for expression data; Belongs to the bacterial glucokinase family. | 0.936 |
| algC | pgi | PSPTO_0083 | PSPTO_0959 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Glucose-6-phosphate isomerase; Identified by match to PFAM protein family HMM PF00342; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00342. | 0.936 |
| algC | pgm | PSPTO_0083 | PSPTO_3035 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Phosphoglucomutase, alpha-D-glucose phosphate-specific; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02878. | 0.943 |
| algC | tal | PSPTO_0083 | PSPTO_2119 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.828 |
| algC | tkt | PSPTO_0083 | PSPTO_0385 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.924 |
| algC | zwf-1 | PSPTO_0083 | PSPTO_1300 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.825 |
| algC | zwf-2 | PSPTO_0083 | PSPTO_3121 | Phosphomannomutase AlgC; The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to its phosphoglucomutase activity. Essential for biofilm production (By similarity). | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.825 |
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