STRINGSTRING
AAO58944.1 AAO58944.1 AAO58945.1 AAO58945.1 AAO58946.1 AAO58946.1 AAO58942.1 AAO58942.1 AAO56962.1 AAO56962.1 AAO56084.1 AAO56084.1 AAO57654.1 AAO57654.1 AAO58082.1 AAO58082.1 AAO55976.1 AAO55976.1 rpmE-1 rpmE-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AAO58944.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (216 aa)    
Predicted Functional Partners:
AAO58945.1
Cobalamin synthesis protein/P47K family protein; See PMID:20190049 for expression data.
 
  
 0.969
AAO58946.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.744
AAO58942.1
Cobalamin synthesis protein/P47K family protein; See PMID:20190049 for expression data.
 
  
 0.637
AAO56962.1
dnaK suppressor protein, putative; Similar to SP:P18274; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18274, identified by sequence similarity, putative.
  
    0.507
AAO56084.1
Carbonic anhydrase-related protein; See PMID:20190049 for expression data; similar to GP:6127222, and SP:P40881; identified by sequence similarity; putative.
  
    0.477
AAO57654.1
Cobalamin synthesis protein/P47K family protein; Similar to GP:15075711; identified by sequence similarity; putative.
 
  
 0.451
AAO58082.1
Cobalamin synthesis protein/P47K family protein.
 
  
 0.447
AAO55976.1
Protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.432
rpmE-1
Ribosomal protein L31; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01197.
   
    0.426
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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