Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO54070.1 | AAO58957.1 | PSPTO_0527 | PSPTO_5538 | Hypothetical protein; Identified by Glimmer2; putative. | Dual specificity phosphatase, catalytic domain protein; Similar to GP:9948596; identified by sequence similarity; putative. | 0.749 |
| AAO54070.1 | cfa6 | PSPTO_0527 | PSPTO_4686 | Hypothetical protein; Identified by Glimmer2; putative. | Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...] | 0.515 |
| AAO54872.1 | AAO58955.1 | PSPTO_1350 | PSPTO_5536 | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | Identified by match to PFAM protein family HMM PF01066. | 0.485 |
| AAO54872.1 | AAO58956.1 | PSPTO_1350 | PSPTO_5537 | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | 0.524 |
| AAO54872.1 | AAO58957.1 | PSPTO_1350 | PSPTO_5538 | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | Dual specificity phosphatase, catalytic domain protein; Similar to GP:9948596; identified by sequence similarity; putative. | 0.553 |
| AAO54872.1 | AAO58959.1 | PSPTO_1350 | PSPTO_5540 | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | Acyltransferase, putative; Similar to GP:15073417; identified by sequence similarity; putative. | 0.452 |
| AAO54872.1 | cdsA-2 | PSPTO_1350 | PSPTO_5541 | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | Phosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148. | 0.502 |
| AAO58516.1 | AAO58956.1 | PSPTO_5089 | PSPTO_5537 | Conserved hypothetical protein; Similar to GP:15978939; identified by sequence similarity; putative. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | 0.432 |
| AAO58516.1 | AAO58957.1 | PSPTO_5089 | PSPTO_5538 | Conserved hypothetical protein; Similar to GP:15978939; identified by sequence similarity; putative. | Dual specificity phosphatase, catalytic domain protein; Similar to GP:9948596; identified by sequence similarity; putative. | 0.508 |
| AAO58955.1 | AAO54872.1 | PSPTO_5536 | PSPTO_1350 | Identified by match to PFAM protein family HMM PF01066. | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | 0.485 |
| AAO58955.1 | AAO58956.1 | PSPTO_5536 | PSPTO_5537 | Identified by match to PFAM protein family HMM PF01066. | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | 0.940 |
| AAO58955.1 | AAO58957.1 | PSPTO_5536 | PSPTO_5538 | Identified by match to PFAM protein family HMM PF01066. | Dual specificity phosphatase, catalytic domain protein; Similar to GP:9948596; identified by sequence similarity; putative. | 0.951 |
| AAO58955.1 | AAO58958.1 | PSPTO_5536 | PSPTO_5539 | Identified by match to PFAM protein family HMM PF01066. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.703 |
| AAO58955.1 | AAO58959.1 | PSPTO_5536 | PSPTO_5540 | Identified by match to PFAM protein family HMM PF01066. | Acyltransferase, putative; Similar to GP:15073417; identified by sequence similarity; putative. | 0.930 |
| AAO58955.1 | cdsA-2 | PSPTO_5536 | PSPTO_5541 | Identified by match to PFAM protein family HMM PF01066. | Phosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148. | 0.995 |
| AAO58955.1 | cfa6 | PSPTO_5536 | PSPTO_4686 | Identified by match to PFAM protein family HMM PF01066. | Coronafacic acid polyketide synthase I; This gene is the first of two multimodular polyketide synthetases involved in the biosynthesis of coronafacic acid. This synthetase is proposed to receive CPC (2-carboxy-2-cyclopentenone) from an acyl carrier protein (cfa1), it then adds a buyrate group and then completely reduces the ketone of the (former) carboxylate group. The resulting product is then passed to the second polyketide synthetase (cfa7); similar to GP:13346874; identified by sequence similarity; putative; see PMID:20190049 for expression data; This gene is the first of two multi [...] | 0.557 |
| AAO58956.1 | AAO54872.1 | PSPTO_5537 | PSPTO_1350 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | Protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01435. | 0.524 |
| AAO58956.1 | AAO58516.1 | PSPTO_5537 | PSPTO_5089 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | Conserved hypothetical protein; Similar to GP:15978939; identified by sequence similarity; putative. | 0.432 |
| AAO58956.1 | AAO58955.1 | PSPTO_5537 | PSPTO_5536 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | Identified by match to PFAM protein family HMM PF01066. | 0.940 |
| AAO58956.1 | AAO58957.1 | PSPTO_5537 | PSPTO_5538 | Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01250. | Dual specificity phosphatase, catalytic domain protein; Similar to GP:9948596; identified by sequence similarity; putative. | 0.964 |
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