STRINGSTRING
AAO58978.1 AAO58978.1 AAO58977.1 AAO58977.1 prfA prfA AAO58979.1 AAO58979.1 AAO58980.1 AAO58980.1 AAO58981.1 AAO58981.1 AAO58982.1 AAO58982.1 AAO58945.1 AAO58945.1 AAO58946.1 AAO58946.1 cysC cysC atpE atpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AAO58978.1Conserved hypothetical protein; Belongs to the methyltransferase superfamily. (324 aa)    
Predicted Functional Partners:
AAO58977.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.917
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.838
AAO58979.1
TonB-dependent receptor; Identified by match to TIGR protein family HMM TIGR01783.
     
 0.777
AAO58980.1
Iron-compound ABC transporter, ATP-binding protein, putative; Similar to GP:11071207, and SP:P07821; identified by sequence similarity; putative.
       0.648
AAO58981.1
Iron compound ABC transporter, iron compound-binding protein; Similar to GP:14027559; identified by sequence similarity; putative.
       0.648
AAO58982.1
Hemin ABC transporter, permease protein, putative; Similar to GP:11071206, and GP:5006425; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.648
AAO58945.1
Cobalamin synthesis protein/P47K family protein; See PMID:20190049 for expression data.
      
 0.503
AAO58946.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
      
 0.503
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
       0.499
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.471
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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