STRINGSTRING
ABD93120.1 ABD93120.1 hopAS1 hopAS1 AAO54019.1 AAO54019.1 AAO54020.1 AAO54020.1 AAO54021.1 AAO54021.1 AAO54022.1 AAO54022.1 AAO54023.1 AAO54023.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
ABD93120.1Conserved hypothetical protein; Similar to gene downstream of PSPPH4735. (36 aa)    
Predicted Functional Partners:
hopAS1
Type III effector HopAS1; This region contains an authentic point mutation causing a premature stop and is not the result of a sequencing artifact; identified by sequence similarity to the N-terminal regions of HopAS1 in Pseudomonas syringae phaseolicola; previously known as ORF01152 (PMID11854524; Fouts et al, 2002).
       0.651
AAO54019.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
AAO54020.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
AAO54021.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
AAO54022.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
AAO54023.1
Conserved domain protein; Similar to GP:17427973; identified by sequence similarity; putative.
       0.447
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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