STRINGSTRING
Smal_2284 Smal_2284 Smal_2282 Smal_2282 Smal_2283 Smal_2283 Smal_3280 Smal_3280 Smal_3419 Smal_3419 Smal_2093 Smal_2093 Smal_2281 Smal_2281
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_2284PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: psa:PST_0013 hypothetical protein. (112 aa)    
Predicted Functional Partners:
Smal_2282
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.773
Smal_2283
PFAM: flavin reductase domain protein FMN-binding; KEGG: rso:RSc1836 hypothetical protein.
       0.773
Smal_3280
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.466
Smal_3419
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: atc:AGR_pAT_528 hypothetical protein.
  
     0.460
Smal_2093
KEGG: cvi:CV_0689 hypothetical protein.
 
 
   0.441
Smal_2281
PFAM: Thioredoxin domain; KEGG: xcv:XCV3996 putative disulphide-isomerase precursor.
       0.410
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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