STRINGSTRING
Smal_1421 Smal_1421 Smal_2162 Smal_2162 Smal_2337 Smal_2337 Smal_2365 Smal_2365 Smal_1420 Smal_1420 Smal_3322 Smal_3322
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Smal_1421Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: psa:PST_0168 transcriptional regulator, AraC family. (277 aa)    
Predicted Functional Partners:
Smal_2162
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cak:Caul_5108 transcriptional regulator, AraC family.
  
     0.686
Smal_2337
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: xcb:XC_1940 transcriptional regulator.
  
     0.642
Smal_2365
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbr:BB3898 transcriptional regulator.
  
     0.625
Smal_1420
KEGG: dac:Daci_3561 hypothetical protein.
       0.529
Smal_3322
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: xac:XAC3445 transcriptional regulator.
  
   0.447
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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