STRINGSTRING
AEF23615.1 AEF23615.1 AEF20221.1 AEF20221.1 AEF22390.1 AEF22390.1 AEF21522.1 AEF21522.1 bamD bamD bamA bamA AEF23906.1 AEF23906.1 bamB bamB AEF23614.1 AEF23614.1 AEF21834.1 AEF21834.1 AEF21140.1 AEF21140.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AEF23615.1PFAM: Lipoprotein SmpA/OmlA; KEGG: psa:PST_1092 DNA-binding transcriptional activator OsmE. (117 aa)    
Predicted Functional Partners:
AEF20221.1
Peroxiredoxin, OsmC subfamily; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; KEGG: pmy:Pmen_4453 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein.
   
  
 0.815
AEF22390.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: pap:PSPA7_4067 hypothetical protein.
   
  
 0.787
AEF21522.1
KEGG: pmy:Pmen_1664 hypothetical protein.
   
 
 0.708
bamD
Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.695
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.679
AEF23906.1
KEGG: pmy:Pmen_4017 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA.
   
    0.656
bamB
Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.604
AEF23614.1
Hypothetical protein; KEGG: azo:azo0342 N-hydroxyarylamine O-acetyltransferase.
       0.559
AEF21834.1
KEGG: pmy:Pmen_3001 membrane protein-like protein.
   
    0.553
AEF21140.1
KEGG: pfl:PFL_1145 hypothetical protein.
   
  
 0.547
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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