STRINGSTRING
EIJ33579.1 EIJ33579.1 EIJ33580.1 EIJ33580.1 EIJ33581.1 EIJ33581.1 EIJ35623.1 EIJ35623.1 EIJ34913.1 EIJ34913.1 EIJ34021.1 EIJ34021.1 EIJ35222.1 EIJ35222.1 EIJ35618.1 EIJ35618.1 EIJ36189.1 EIJ36189.1 EIJ34393.1 EIJ34393.1 EIJ35491.1 EIJ35491.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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EIJ33579.1TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: psa:PST_1713 TonB domain-containing protein; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB protein, C-terminal domain; TIGRFAM: TonB, C-terminal. (256 aa)    
Predicted Functional Partners:
EIJ33580.1
PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR014171; KEGG: tcx:Tcr_1623 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; TIGRFAM: TonB system transport protein ExbD type-2.
 
 
 0.966
EIJ33581.1
Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898:IPR014172; KEGG: ccv:CCV52592_1240 TonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: TonB-system energizer ExbB; TIGRFAM: TonB-system energizer ExbB type-2; (TC 2.C.1.1.1).
  
 
 0.945
EIJ35623.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010100:IPR012910:IPR000531; KEGG: tgr:Tgr7_0677 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TIGRFAM: TonB-dependent copper receptor.
 
 
 0.939
EIJ34913.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531:IPR010101; KEGG: neu:NE0636 TonB-dependent receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor protein; TIGRFAM: TonB-dependent vitamin B12 receptor.
 
 
 
 0.910
EIJ34021.1
KEGG: sdl:Sdel_2245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.884
EIJ35222.1
PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Transketolase, C-terminal domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR019752:IPR001450:IPR011766; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate [...]
    
  0.876
EIJ35618.1
KEGG: scl:sce6904 hypothetical protein; SPTR: Predicted protein.
  
 
 0.862
EIJ36189.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: tgr:Tgr7_1370 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR.
  
 
 0.857
EIJ34393.1
Cell division and transport-associated protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: gag:Glaag_1385 protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Protein TolR; (TC 2.C.1.2.1).
  
 
 0.851
EIJ35491.1
PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2; COGs: COG0848 Biopolymer transport protein; InterPro IPR014171:IPR003400; KEGG: apa:APP7_0077 biopolymer transporter ExbD2; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD2; TIGRFAM: TonB system transport protein ExbD type-2.
  
 
 0.838
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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