STRINGSTRING
Lcho_1769 Lcho_1769 Lcho_1768 Lcho_1768 Lcho_1464 Lcho_1464 Lcho_1599 Lcho_1599 Lcho_1533 Lcho_1533 Lcho_0334 Lcho_0334 Lcho_0332 Lcho_0332 Lcho_1529 Lcho_1529 Lcho_3800 Lcho_3800 Lcho_1524 Lcho_1524 Lcho_3798 Lcho_3798
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
Lcho_1769KEGG: pst:PSPTO_2441 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (692 aa)    
Predicted Functional Partners:
Lcho_1768
PFAM: CheW domain protein; KEGG: neu:NE1397 CheW-like domain.
 
 0.978
Lcho_1464
Multi-sensor hybrid histidine kinase; KEGG: aha:AHA_2188 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein.
  
 
 0.976
Lcho_1599
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mpt:Mpe_A0585 chemotaxis protein histidine kinase.
 
 0.947
Lcho_1533
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aha:AHA_1036 chemotaxis protein CheA.
 
 0.938
Lcho_0334
PFAM: CheW domain protein; KEGG: psb:Psyr_0784 CheW-like protein.
 
 0.937
Lcho_0332
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: asa:ASA_3266 chemotaxis protein CheA.
 
 0.936
Lcho_1529
PFAM: CheW domain protein; KEGG: cvi:CV_1012 signal transduction chemotaxis protein.
 
 0.936
Lcho_3800
PFAM: CheW domain protein; KEGG: rfr:Rfer_0903 CheW protein.
 
 0.936
Lcho_1524
PFAM: CheW domain protein; KEGG: mpt:Mpe_A0587 chemotaxis signal transduction protein.
 
 0.935
Lcho_3798
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rfr:Rfer_0901 CheA signal transduction histidine kinases.
 
 0.923
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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