STRINGSTRING
Smal_1825 Smal_1825 Smal_1183 Smal_1183 Smal_1537 Smal_1537 Smal_1538 Smal_1538 Smal_1346 Smal_1346 Smal_1535 Smal_1535 Smal_0350 Smal_0350 Smal_1536 Smal_1536 Smal_3253 Smal_3253 mqo mqo Smal_2630 Smal_2630
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_1825PFAM: Aldehyde Dehydrogenase_; KEGG: pst:PSPTO_2660 aldehyde dehydrogenase family protein. (461 aa)    
Predicted Functional Partners:
Smal_1183
PFAM: aminotransferase class-III; KEGG: dac:Daci_0137 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.932
Smal_1537
KEGG: xcb:XC_1983 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.926
Smal_1538
KEGG: xcb:XC_1985 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.912
Smal_1346
PFAM: Aldehyde Dehydrogenase_; KEGG: xcv:XCV2647 putative aldehyde dehydrogenase.
  
  
 
0.905
Smal_1535
TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: xfn:XfasM23_0342 succinate dehydrogenase, cytochrome b556 subunit.
   
 
  0.904
Smal_0350
Succinate CoA transferase; KEGG: xcb:XC_0550 CoA tranferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase.
  
 
 0.903
Smal_1536
TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: xac:XAC2076 succinate dehydrogenase membrane anchor subunit.
   
 
 0.902
Smal_3253
KEGG: xac:XAC3388 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
 0.864
mqo
KEGG: xfa:XF0942 malate:quinone oxidoreductase; TIGRFAM: malate/quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; Malate:quinone-oxidoreductase.
   
 
 0.837
Smal_2630
2-oxoglutarate dehydrogenase, E1 subunit; KEGG: xcv:XCV1578 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region.
   
 
 0.826
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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