STRINGSTRING
Cpin_3782 Cpin_3782 Cpin_3781 Cpin_3781 Cpin_2083 Cpin_2083 Cpin_0915 Cpin_0915 Cpin_3783 Cpin_3783 Cpin_2389 Cpin_2389 rpsJ rpsJ Cpin_3779 Cpin_3779 Cpin_3780 Cpin_3780 Cpin_3776 Cpin_3776 Cpin_3777 Cpin_3777
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_3782KEGG: pst:PSPTO_3078 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Cpin_3781
TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: nis:NIS_1187 CcmF/CcyK/CcsA family cytochrome c biogenesis protein.
       0.755
Cpin_2083
Hypothetical protein.
  
 
   0.547
Cpin_0915
Lysophospholipase-like protein; KEGG: net:Neut_2408 esterase/lipase/thioesterase family protein.
 
     0.539
Cpin_3783
PFAM: regulatory protein TetR; KEGG: tcx:Tcr_1301 TetR family transcriptional regulator.
       0.491
Cpin_2389
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 
 0.478
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
   0.456
Cpin_3779
Hypothetical protein.
       0.444
Cpin_3780
KEGG: mxa:MXAN_7466 hypothetical protein.
       0.444
Cpin_3776
KEGG: bha:BH3318 hypothetical protein.
       0.436
Cpin_3777
PFAM: cytochrome c oxidase subunit I; KEGG: rfr:Rfer_4127 cytochrome c oxidase, subunit I.
       0.436
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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