STRINGSTRING
AFM11349.1 AFM11349.1 AFM14499.1 AFM14499.1 AFM14575.1 AFM14575.1 AFM12348.1 AFM12348.1 AFM14338.1 AFM14338.1 AFM12098.1 AFM12098.1 AFM13087.1 AFM13087.1 AFM13820.1 AFM13820.1 uvrC uvrC AFM11422.1 AFM11422.1 AFM11348.1 AFM11348.1
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
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textmining
co-expression
protein homology
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AFM11349.1Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: psa:PST_3577 GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: GGDEF domain protein; TIGRFAM: Diguanylate cyclase, predicted. (362 aa)    
Predicted Functional Partners:
AFM14499.1
Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: HD domain; Response regulator receiver domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789:IPR006674:IPR003607; KEGG: psm:PSM_A1873 response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase); PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD reg [...]
  
 0.945
AFM14575.1
Diguanylate cyclase; PFAM: GGDEF domain; PilZ domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR009875; KEGG: lbf:LBF_2547 GGDEF domain receiver component of a two-component response regulator; PFAM: Diguanylate cyclase, predicted; Type IV pilus assembly PilZ; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted.
  
  
 
0.927
AFM12348.1
Diguanylate phosphodiesterase; PFAM: EAL domain; Cyclic nucleotide-binding domain; COGs: COG2200 FOG: EAL domain; InterPro IPR000595:IPR001633; KEGG: syn:slr0842 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; Cyclic nucleotide-binding; SMART: Diguanylate phosphodiesterase, predicted; Cyclic nucleotide-binding; SPTR: Slr0842 protein.
 
 0.876
AFM14338.1
Diguanylate phosphodiesterase; PFAM: EAL domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: lbf:LBF_0272 signal transduction protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; SPTR: Putative uncharacterized protein.
  
 0.858
AFM12098.1
Diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: EAL domain; GAF domain; GGDEF domain; COGs: COG2200 FOG: EAL domain; InterPro IPR003018:IPR000160:IPR001633; KEGG: bse:Bsel_0666 GAF sensor-containing diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; SPTR: Putative diguanylate cyclase/phosphodiesterase (GGDEF & EALdomains) with PAS/PAC sensor.
  
 0.833
AFM13087.1
PFAM: EAL domain; Response regulator receiver domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001789:IPR001633; KEGG: dba:Dbac_2663 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SPTR: Diguanylate phosphodiesterase.
  
 0.819
AFM13820.1
Diguanylate phosphodiesterase; PFAM: EAL domain; EAL-domain associated signalling protein domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR018842; KEGG: hmo:HM1_1507 eal domain protein, putative; PFAM: Diguanylate phosphodiesterase, predicted; EAL C-terminal; SMART: Diguanylate phosphodiesterase, predicted; SPTR: C-di-GMP phosphodiesterase type 1.
  
 0.819
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
 
 0.761
AFM11422.1
Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: lbl:LBL_1652 response regulator; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Response regulator with HD-GYP domain.
 
 0.748
AFM11348.1
KEGG: lic:LIC12572 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.732
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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