STRINGSTRING
AEF22799.1 AEF22799.1 AEF22800.1 AEF22800.1 AEF24343.1 AEF24343.1 AEF22798.1 AEF22798.1 AEF22136.1 AEF22136.1 AEF24345.1 AEF24345.1 AEF22134.1 AEF22134.1 AEF22356.1 AEF22356.1 AEF23131.1 AEF23131.1 AEF21288.1 AEF21288.1 AEF22948.1 AEF22948.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF22799.1anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: psa:PST_4175 transmembrane sensor. (315 aa)    
Predicted Functional Partners:
AEF22800.1
KEGG: psa:PST_4176 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.962
AEF24343.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppu:PP_4217 outer membrane ferripyoverdine receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.849
AEF22798.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; KEGG: psa:PST_4174 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.848
AEF22136.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppg:PputGB1_3280 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.847
AEF24345.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_44150 FecI-like iron uptake RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.847
AEF22134.1
KEGG: ppg:PputGB1_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.839
AEF22356.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfs:PFLU2787 heme uptake regulator; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.839
AEF23131.1
KEGG: pfl:PFL_3313 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.839
AEF21288.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_10480 ECF sigma factor, FecI family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.832
AEF22948.1
KEGG: rpe:RPE_2646 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.830
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.