Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKE98234.1 | EKE98235.1 | FDUTEX481_04252 | FDUTEX481_04253 | Putative PadR family transcriptional regulator; KEGG: tsi:TSIB_0898 0.0082 putative threonine synthase K01733. | Hypothetical protein; KEGG: nve:NEMVE_v1g160496 0.47 hypothetical protein; K10661 E3 ubiquitin-protein ligase MARCH6; Psort location: CytoplasmicMembrane, score: 10.00. | 0.773 |
EKE98234.1 | EKE98236.1 | FDUTEX481_04252 | FDUTEX481_04254 | Putative PadR family transcriptional regulator; KEGG: tsi:TSIB_0898 0.0082 putative threonine synthase K01733. | Hypothetical protein; KEGG: pfo:Pfl01_0113 0.20 NAD/NADP transhydrogenase, membrane-spanning dIIa subunit; K00324 NAD(P) transhydrogenase subunit alpha. | 0.429 |
EKE98235.1 | EKE98234.1 | FDUTEX481_04253 | FDUTEX481_04252 | Hypothetical protein; KEGG: nve:NEMVE_v1g160496 0.47 hypothetical protein; K10661 E3 ubiquitin-protein ligase MARCH6; Psort location: CytoplasmicMembrane, score: 10.00. | Putative PadR family transcriptional regulator; KEGG: tsi:TSIB_0898 0.0082 putative threonine synthase K01733. | 0.773 |
EKE98235.1 | EKE98236.1 | FDUTEX481_04253 | FDUTEX481_04254 | Hypothetical protein; KEGG: nve:NEMVE_v1g160496 0.47 hypothetical protein; K10661 E3 ubiquitin-protein ligase MARCH6; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; KEGG: pfo:Pfl01_0113 0.20 NAD/NADP transhydrogenase, membrane-spanning dIIa subunit; K00324 NAD(P) transhydrogenase subunit alpha. | 0.429 |
EKE98236.1 | EKE98234.1 | FDUTEX481_04254 | FDUTEX481_04252 | Hypothetical protein; KEGG: pfo:Pfl01_0113 0.20 NAD/NADP transhydrogenase, membrane-spanning dIIa subunit; K00324 NAD(P) transhydrogenase subunit alpha. | Putative PadR family transcriptional regulator; KEGG: tsi:TSIB_0898 0.0082 putative threonine synthase K01733. | 0.429 |
EKE98236.1 | EKE98235.1 | FDUTEX481_04254 | FDUTEX481_04253 | Hypothetical protein; KEGG: pfo:Pfl01_0113 0.20 NAD/NADP transhydrogenase, membrane-spanning dIIa subunit; K00324 NAD(P) transhydrogenase subunit alpha. | Hypothetical protein; KEGG: nve:NEMVE_v1g160496 0.47 hypothetical protein; K10661 E3 ubiquitin-protein ligase MARCH6; Psort location: CytoplasmicMembrane, score: 10.00. | 0.429 |