STRINGSTRING
AEF22630.1 AEF22630.1 AEF23636.1 AEF23636.1 AEF22631.1 AEF22631.1 gcvP gcvP AEF22632.1 AEF22632.1 AEF21989.1 AEF21989.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AEF22630.1KEGG: pfo:Pfl01_1500 transcriptional regulator TyrR; PFAM: RNA polymerase sigma factor 54, interaction; Amino acid-binding ACT; PAS fold; SMART: PAS; ATPase, AAA+ type, core. (517 aa)    
Predicted Functional Partners:
AEF23636.1
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.768
AEF22631.1
TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form; KEGG: ppg:PputGB1_3995 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal.
 
   
 0.629
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.488
AEF22632.1
KEGG: pag:PLES_44451 pterin-4-alpha-carbinolamine dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase.
     
 0.465
AEF21989.1
Chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: pmy:Pmen_1850 prephenate dehydratase; SMART: Chorismate mutase.
      
 0.416
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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