Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADV27976.1 | ADV27977.1 | Psesu_2141 | Psesu_2142 | PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: xal:XALc_0901 hypothetical protein. | PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3539 FAD/FMN-containing dehydrogenases-like protein. | 0.648 |
ADV27976.1 | ADV27978.1 | Psesu_2141 | Psesu_2143 | PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: xal:XALc_0901 hypothetical protein. | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | 0.460 |
ADV27977.1 | ADV27976.1 | Psesu_2142 | Psesu_2141 | PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3539 FAD/FMN-containing dehydrogenases-like protein. | PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: xal:XALc_0901 hypothetical protein. | 0.648 |
ADV27977.1 | ADV27978.1 | Psesu_2142 | Psesu_2143 | PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3539 FAD/FMN-containing dehydrogenases-like protein. | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | 0.547 |
ADV27978.1 | ADV27976.1 | Psesu_2143 | Psesu_2141 | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: xal:XALc_0901 hypothetical protein. | 0.460 |
ADV27978.1 | ADV27977.1 | Psesu_2143 | Psesu_2142 | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3539 FAD/FMN-containing dehydrogenases-like protein. | 0.547 |
ADV27978.1 | ADV28534.1 | Psesu_2143 | Psesu_2706 | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | KEGG: xop:PXO_00366 general stress protein. | 0.428 |
ADV27978.1 | rimO | Psesu_2143 | Psesu_1958 | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.640 |
ADV28534.1 | ADV27978.1 | Psesu_2706 | Psesu_2143 | KEGG: xop:PXO_00366 general stress protein. | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | 0.428 |
rimO | ADV27978.1 | Psesu_1958 | Psesu_2143 | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Cytochrome b561; KEGG: pfo:Pfl01_3685 cytochrome b561. | 0.640 |