STRINGSTRING
M301_1246 M301_1246 M301_1245 M301_1245 M301_1244 M301_1244 M301_1248 M301_1248 M301_0751 M301_0751 M301_2273 M301_2273 M301_0578 M301_0578 M301_1247 M301_1247 M301_1451 M301_1451 M301_0975 M301_0975 apt apt
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M301_1246KEGG: pfo:Pfl01_4048 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase. (426 aa)    
Predicted Functional Partners:
M301_1245
PFAM: ABC-2 type transporter; KEGG: pfo:Pfl01_4049 hypothetical protein.
 
 0.999
M301_1244
PFAM: glycosyl transferase family 2; KEGG: bvi:Bcep1808_3219 glycosyl transferase family protein.
 
  
 0.836
M301_1248
PFAM: Rhamnan synthesis F; KEGG: mno:Mnod_4336 lipopolysaccharide biosynthesis protein-like protein.
 
   
 0.800
M301_0751
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mei:Msip34_1836 polysaccharide export protein EpsE.
  
  
 0.694
M301_2273
KEGG: mei:Msip34_1836 polysaccharide export protein EpsE; TIGRFAM: polysaccharide export protein EpsE; PFAM: polysaccharide export protein; Soluble ligand binding domain.
  
  
 0.694
M301_0578
PFAM: phosphoribosyltransferase; KEGG: mei:Msip34_0562 hypothetical protein.
   
    0.611
M301_1247
2OG-Fe(II) oxygenase; KEGG: pfl:PFL_2029 SanC, putative; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
       0.586
M301_1451
Non-ribosomal peptide synthetase; KEGG: dar:Daro_0174 amino acid adenylation; TIGRFAM: non-ribosomal peptide synthetase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.560
M301_0975
PFAM: CsbD family protein; KEGG: eba:ebB174 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.460
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.451
Your Current Organism:
Methylotenera versatilis 301
NCBI taxonomy Id: 666681
Other names: M. versatilis 301, Methylotenera sp. 301, Methylotenera versatilis str. 301, Methylotenera versatilis strain 301
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